Try the latest version


Download Blast2GO 5.2

Download here the latest version of Blast2GO for free (on the right). The download contains an executable installer which will install Blast2GO on your computer. Choose between Windows, Mac or Linux based versions. No need to install Java.

What is Blast2GO?

Blast2GO is a bioinformatics platform for high-quality functional annotation and analysis of genomic datasets. It allows analyzing and visualizing newly sequenced genomes by combining state-of-the-art methodologies, standard resources and algorithms. Blast2GO allows to gain biological insights fast and easy even for completely novel genomes. Perform out-of-the-box the entire workflow of functional annotation of your transcriptomic datasets including its analysis and biological interpretation. More here.

How do I get the free activation key for Blast2GO Basic?

Just click here and register with your name and email and we will send you your key immediately. Registration takes less than 1 minute.

What is the difference between Blast2GO Basic and PRO?


Functional Annotation (GO assignment) % %
Basic statistical charts for all major analysis steps % %
Graphical Gene Ontology data mining % %
Enrichment Analysis using Fisher's Exact Test % %
Blast2GO Apps (PSORTb, Venn Diagram, etc.) % %
Access to cloud-based options (Blast, InterPro, etc.) X %
High-Performance Blast2GO PRO GO Mapping and Annotation X %
Gene Finding for Eukaryotes and Prokaryotes X %
Differential Expression Analysis for Pairwise and TimeCourse X %
DeNovo RNA-Seq Transcript Quantification X %
More Annotation features (taxa filter, validation, etc.) X %
Work with multiple datasets in parallel X %
Workflows (Design, Run, Share) X %
Select subsets of sequences based on its biological functions, names, etc. X %
GFF Viewer X %
Gene Set Enrichment Analysis (GSEA) X %
Advanced statistical charts (WordCloud, TreeMap) X %
Advanced GO Graph Visualization (Color Graphs, etc.) X %
Sequences Toolbox (batch rename, find similar, translate to longest ORF, etc.) X %
Many data-export options (PDF reports, custom fasta, annot and generic data formats) X %
BioMart data import (Verteb., Metazoa, Plants, Protists, Fungi) X %
Priority Support X %


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Scientific Impact of Blast2GO

Publications, Citations and Testimonials.